Words similar to proteome
Example sentences for: proteome
How can you use “proteome” in a sentence? Here are some example sentences to help you improve your vocabulary:
Protein sets (proteomes) from the following pairs of complete genome sequences were compared in order to identify orthologous sequences: S. cerevisiae - S. pombe , S. cerevisiae - C. elegans , H. pylori strain 26695 - H. pylori strain J99, H. pylori strain 26695 - C. jejuni . Pairs of proteomes were compared using the BLASTP program [ 18 ] , with post-processing of results done using the SEALS package [ 19 ] . For each proteome, individual proteins were used as queries in BLASTP searches against the entire proteome of the other analyzed species (or strain).
In my genomics class, students have three assignments for which they are required to mine databases for sequence, transcriptome, and proteome information (see www.bio.davidson.edu/courses/genomics/2003/cain/home.html).
We used a MySQL [ 14] database to manage the large number of analyses run against the genome, transcriptome and proteome (see below).
Studies of the yeast proteome have the potential to clarify the function of midasin by identifying the protein partners with which it interacts in vivo.
We prepared a multiple alignment of these regions from all the proteins detected in these searches (Figure 1) and used it to construct a PSI-BLAST position-specific score matrix (PSSM) [ 34] and a hidden Markov model [ 35] for further searches against the complete or nearly complete proteome databases of individual eukaryotes.