Words similar to pdb

Example sentences for: pdb

How can you use “pdb” in a sentence? Here are some example sentences to help you improve your vocabulary:

Some examples are listed in Table 4. For example, the AP2-domain is a DNA-binding transcription factor that controls flower and seed development [ 20 ] in Arabidopsis . The structure of the AP2 domain is found in the PDB (1gcc) [ 21 ] . Standard BLAST using the 1gcc sequence provides 140 hits at p < 0.1 (a very weak threshold).
Searches of the PDB database with query structures was conducted using the DALI program [ 70, 71].
Whereas other resources are limited to what is present in PDB or SCOP, PAT provides additional domains from PDP, and genetic domains from Astral.
Using the secondary structure elements from the experimentally determined structures of IPNS (PDB:1ips), DAOCS (PDB:1dcs), CAS (PDB:1drt) and the predicted secondary structures for individual families, the conserved core of these elements was delineated (Figure 1).
Table 4shows the average results of different combinations of move sets and search methods for a set of six proteins (PDB codes: 1ctf, 1e68, 1eh2, 1nkl, 1pgb, 1sro; four of these were CASP targets).