Example sentences for: tblastn

How can you use “tblastn” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • The intron position assignments were aided by an alignment of the acquired C. intestinalis Runx gene with partial cDNA sequences obtained from a TBLASTN search using the S. purpuratus SpRunt-1 protein sequence to query the C. intestinalis cDNA project site at http://ghost.zool.kyoto-u.ac.jp/indexr1.html.

  • Using the amino-acid sequence of the conserved motor domain of the plant myosin MYA1 [ 41], databases were searched using BLASTP and TBLASTN at TAIR [ 11].

  • The midasin gene in Giardia intestinalis (accession AF494287) was cloned in silico from sets 1-11 of the unassembled genomic nucleotide sequences kindly made available by the Giardia Genome Project [ 11 ] . Regions of conserved amino acid sequence in the human and yeast genes for midasin were used as input to the Tblastn server at Genbank [ 56 ] to identify clones that encoded homologous regions in Giardia.

  • TBLASTN analysis of each intervening Arabidopsis gene against the Tomato Gene Index [ 20] generated 260 TBLASTN hits that were chosen for further investigation on the basis of the original annotation of the Arabidopsis gene and a low expect value (< e -20).

  • All ORFs longer than 250 amino acids were conceptually translated and compared to the entirety of GenBank by the tblastn and blastp searches.


How many words do you know? Try our free vocabulary size test!


Search

Search for example sentences

Loading Loading...
Quantcast