Example sentences for: tblastn

How can you use “tblastn” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • Using the amino-acid sequence of the conserved motor domain of the plant myosin MYA1 [ 41], databases were searched using BLASTP and TBLASTN at TAIR [ 11].

  • The only major modification to this pipeline was to add an additional tier of evidence containing the results of TBLASTN searches of all Release 3 D. melanogaster peptides [ 14] against non-melanogaster sequences.

  • Our sequence determination was continuously refined with the results of repeated BlastN and tBlastN database searches with the updated contigs, and finally we extended our search by using genomic databases.

  • 9%) we were not able to obtain a clear homolog (defined as a high-scoring pair (HSP) with an expected (E) value less than 10 -20and greater than or equal to 30% identity over 100 amino acids using default parameters of TBLASTN) in the A. gambiae mapped scaffold sequences; 11 of these 21 genes did not yield any HSPs at all.

  • Sequence searches were performed with the web-based programs Blast and PsiBlast at http://www3.ncbi.nlm.nih.gov/BLAST/for sequences that were deposited in data bases and by tblastn at http://www.ncbi.nlm.nih.gov/MicrobJ3last/unfinishedgenome.htmlfor unpublished microbial sequences.


How many words do you know? Try our free vocabulary size test!


Search

Search for example sentences

Loading Loading...
Quantcast