Words similar to tblastx

Example sentences for: tblastx

How can you use “tblastx” in a sentence? Here are some example sentences to help you improve your vocabulary:

This pipeline aligns Drosophila ESTs, cDNA sequences, and other sequences in GenBank using sim4 [ 53], performs DNA and protein sequence similarity searches of the GenBank and SwissProt/TrEMBL databases using BLASTX and TBLASTX, and executes the gene-prediction algorithms Genie [ 68] and Genscan [ 69].
The e-value for the best match to bacteria, C. elegans and Drosophila resulting from a TBLASTX search for the NMh dataset
We then examined nine remaining preliminary gene models with a TBLASTX E-value of less than 1 × 10 -9when compared to a database of transposable elements [ 32], and we retained all but one of them in our annotation.
To detect proteins with significant sequence similarity, we used BLASTX to compare translated genomic sequence to peptides in other species included in SWALL [ 13, 83], and TBLASTX to compare translated genomic sequence to virtual translations of the rodent UniGene set [ 84] and insect sequences in dbEST [ 69].
We now find that 10,996 (82%) of the Release 3 protein-coding genes show a match by BLASTX or TBLASTX (with expectation value less than or equal to 1 × e -7).