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Example sentences for: rdna
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To infer baseline interspecies evolutionary relationships we performed a phylogenetic analysis of the 16S rDNA (SSU) sequences from the seven MoeZ-containing strains included in our study.
For bacterial 16S rDNAs (Figure 2) sequenced using Bact27F, the Bact517 conserved site is ideal because: 1) the Bact517 site is highly conserved and should be easy to find in most bacterial 16S rDNA sequences 2) the site is ~500 bp away from the sequencing primer, therefore sequence 5' of this site should be good quality, and 3) the Bact517 site is just 3' of the V3 region.
Sequencing large 16S rDNA libraries as we have outlined here offers the advantages of sequence data, while minimizing cost (i.e.
, vapor-phase hydrogen peroxide), extreme desiccation, and even gamma radiation are the most common contaminants found on surfaces of cleaned spacecraft assembled in spacecraft assembly clean rooms [ 25 ] . These survivors include cultivable species such as Bacillus licheniformis, B. pumilus, B. cereus , and B. circulans , as well as other strains that have not yet been cultivated but can be observed through their DNA 16S rDNA fingerprints.
There are two extreme interpretations of our analysis of the Net1(7m) and Net1 (19m') mutants: First, Cdc5 is not directly involved in disrupting the RENT complex, and second, Cdc5 directly disassembles the RENT complex via phosphorylation of Net1, but because it is not feasible to evaluate all possible 10 9(=2 30) combinations of phospho-site mutants or because the sites phosphorylated by Cdc5 in vivo are different from those in vitro due to the presence of factors such as Sir2, Pol I, and rDNA [ 10 23 ] , we missed key phosphorylation sites that would have given a more definitive phenotype when mutated.
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