Words similar to rdrp

Example sentences for: rdrp

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All RDRP sequences contain two closely spaced lysines, which are conserved in the YRH proteins (Fig.
We also ran database searches using the PHI-BLAST program that combines a regular BLAST search with a pattern search [ 60 ] . In these searches, the active site motif was used as the pattern query, and various RDRP sequences as the sequence queries.
The functions of these previously unnoticed modules and the nature of the apparent congruence in the evolution of the two RDRP subunits in a subset of bacteria remain to be elucidated.
Interestingly, the PSI-BLAST searches started with the sequences of the RDRP module of the RDRPs and the YRH proteins consistently retrieved the β' subunits of DDRPs, albeit at statistically not significant E-values.
Multiple alignment constructed on the basis of sequence alignments produced in the PSI-BLAST and PHI-BLAST searches and superposition of the predicted secondary structure elements of RDRP and the experimentally determined structure of DDRP revealed considerable concordance between the RDRP and DDRP families.