Words similar to phylip

Example sentences for: phylip

How can you use “phylip” in a sentence? Here are some example sentences to help you improve your vocabulary:

The MOLPHY and Phylip software packages were used for the analyses [ 46 47 ] .
Maximum likelihood pairwise distances are calculated using BLOSUM matrices [ 25 ] by a modified version of TREE-PUZZLE [ 34 ] . Neighbor joining trees are calculated by a modified version of NEIGHBOR from the PHYLIP package [ 35 ] http://evolution.genetics.washington.edu/phylip.html.
Neighbor-joining (PHYLIP), Fitch and Margolash (Fitch in PHYLIP), and maximum parsimony methods [ 21] all produced trees consistent with one another.
95 [ 41 42 ] [ 43 ] . Trees were constructed from the distance matrices obtained with the above distance estimates using the neighbor-joining method [ 40 ] as implemented in the NEIGHBOR program of the PHYLIP package [ 44 ] . Bootstrap values were estimated by resampling the set of orthologs identified for each pair of genomes 1000 times and reconstructing trees from the distributions of the distances from these resampled sets.
Phylogenetic analysis was done using either ClustalX or Phylip 3.6 [ 65] software using the neighbor-joining method [ 62] and standard parameters.