Example sentences for: phylip

How can you use “phylip” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • Bootstrap values were calculated using ClustalX and PHYLIP.

  • The alignment in Phylip format of the original sequences, before any manual adjustments were made

  • The resulting datasets were subjected to 1,000 (Clustal) or 100 (Phylip) rounds of bootstrapping [ 66] to evaluate the statistical significance of the consensus tree topologies.

  • Briefly, this process involved the construction of a least-squares tree using the FITCH program or a neighbor-joining tree using the NEIGHBOR program (both from the Phylip package) [ 38], followed by local rearrangement using the Protml program of the Molphy package [ 37] to arrive at the maximum likelihood (ML) tree.

  • Inferences about the evolutionary relationships within the TrpEa and TrpEb protein families were made using the PHYLIP package of programs [ 20].


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