Words similar to phrap

Example sentences for: phrap

How can you use “phrap” in a sentence? Here are some example sentences to help you improve your vocabulary:

The raw traces for submitted ESTs were base-called using Phred [ 87 ] and assembled to form contigs using Phrap (P.
Although Phrap is a program intended for genome assembly, it has been applied previously to ESTs with modifications [ 90 ] . To determine initial assembly quality, the largest contigs were inspected using the assembly viewer Consed [ 91 ] . Misassemblies bringing unrelated ESTs together into giant contigs usually resulted from the alignment of long poly(A) tails.
To reduce data redundancy, improve base accuracy and transcript length, and determine gene representation within the library, ESTs from the M. incognita L2 library were grouped by sequence identity into contigs and clusters by a method using Phrap and BLAST.
Using deconstruct.pl, we extracted local regions from the main assembly and reassembled the associated traces and their mate pairs at high stringency using phrap.
9 Mb non-redundant sequence) had no difficult repeats and assembled easily using phrap.