Words similar to interpro

Example sentences for: interpro

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This allows queries by gene, by genomic or map region, by Gene Ontology (GO) assignments or by InterPro domains.
The actual mappings are more complicated than one-to-one: the 693 clusters with InterPro alignments match to 379 InterPro domains, and the 475 clusters with GO assignments have 764 mappings to 127 GO categories.
InterProScan was used to match Meloidogyne clusters to characterized protein domains (5,875 entries) in the InterPro database [ 37 ] . Existing mappings of InterPro domains allowed placement of Meloidogyne clusters into the GO hierarchy, viewed locally with the AmiGO browser.
The GO categorization scheme (go_200205-assocdb.sql) of classification by biological process, cellular component, and molecular function was used to classify clusters based on the existing mappings of InterPro domains to the GO hierarchy [ 36 ] . Mappings were stored in a local MySQL database and displayed using the AmiGO browser (16 May 2002) [ 100 ] ( M. incognita mappings at [ 101 ] ).
Of 1,625 clusters, 1,280 (79%) have homologies beyond M. incognita , 693 (43%) align to InterPro domains, and 475 (29%) map to the GO hierarchy.