Example sentences for: interpro

How can you use “interpro” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • For protein superfamilies, 21 out of 606 families account for half of the 15,450 assigned domains, and only 37 of 1,936 InterPro families match half of the 12,589 assigned proteins.

  • We used the translated protein sequences from these intergenic ORFs and analyzed them using InterPro Scan via EXPASY.

  • Sequences for proteins showing sequence similarity to these proteins were also checked by InterProScan and any protein containing an EF-hand domain but not found on the InterPro Domain Table was added to the list.

  • To identify EF-hand-containing proteins in Arabidopsis, the protein sequences listed as having EF-hands in the InterPro Domain Table at MAtDB [ 39] were retrieved.

  • The GO categorization scheme (go_200205-assocdb.sql) of classification by biological process, cellular component, and molecular function was used to classify clusters based on the existing mappings of InterPro domains to the GO hierarchy [ 36 ] . Mappings were stored in a local MySQL database and displayed using the AmiGO browser (16 May 2002) [ 100 ] ( M. incognita mappings at [ 101 ] ).


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