Words similar to hsps
Example sentences for: hsps
How can you use “hsps” in a sentence? Here are some example sentences to help you improve your vocabulary:
Calnexin, Calreticulin, GRP94 (glycoprotein 96) and GRP78 (BiP) have been identified on the cell surface of immature thymocytes [ 16 17 ] . Cell surface expression of GRP94 is found in lymphocytes and lymphoid-like cells from several vertebrate species and is phylogenetically conserved [ 18 ] . Calnexin has been found on the surface of pro-B cells [ 19 ] , as well as in a variety of mammalian culture cells [ 20 ] and a number of HSPs are found expressed on the cell surface in human and murine tumor cells [ 21 22 23 24 ] . Calreticulin, GRP78 and PDI were described on the plasma membrane of different cell types [ 25 26 27 28 ] ; GRP78, GRP94, and PDI, have been found on the surface of rat exocrine pancreatic cells [ 29 30 ] , and GRP78 cell surface expression was recently shown in human endothelial cells [ 31 ] .
Remove poly(A) tail is a Boolean to indicate that short terminal HSPs consisting primarily of runs of a single base (either T or A because we could not be certain of the strand) are to be removed.
We run BLASTN [ 20, 21] with the '-B 0' option, as we are only interested in the summary part of the BLAST report, not in the high-scoring pairs (HSPs) portion where the alignments are shown.
Homologs were identified as HSPs with an expected value < 10 -20and ≥ 30% identity over 100 amino acids.
The high-scoring pairs (HSPs) identified by bl2seq were scored heuristically by considering three factors: the HSP position in the 5' flank of the L1; the HSP position in the 3' flank of the L1; and HSP quality score.
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