Words similar to hsps

Example sentences for: hsps

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9%) we were not able to obtain a clear homolog (defined as a high-scoring pair (HSP) with an expected (E) value less than 10 -20and greater than or equal to 30% identity over 100 amino acids using default parameters of TBLASTN) in the A. gambiae mapped scaffold sequences; 11 of these 21 genes did not yield any HSPs at all.
All complete CYTH domain sequences were aligned using the T_Coffee program, and this alignment was further refined based on the PSI-BLAST HSPs, conserved motifs detected in the Gibbs sampling procedure and predicted secondary structure for the individual groups (Fig.
The high-scoring segment pairs (HSPs) detected in these searches aligned the highly conserved region of the RDRPs between the predicted strands 18 and 20, including the DbDGD motif, with the portion of the DDRP β' subunit sequence, which contains the metal-chelating active site, with a similar conserved motif, DxDGD.
Remove poly(A) tail is a Boolean to indicate that short terminal HSPs consisting primarily of runs of a single base (either T or A because we could not be certain of the strand) are to be removed.
Constitutive expression of a number of HSPs and molecular chaperones has been characterized in immature oocytes and mature mouse eggs [ 38 39 40 ] , though none as yet have been localized to the oolemma.