Words similar to blastn
- blarney
- blas
- blasius
- blasphemy
- blast
- blast-bit-score
- blast-detected
- blast-formatted
- blastcl
- blastclust
- blasted
- blaster
- blasters
- blastic
- blasticidin
- blasting
- blastn
- blastn-based
- blastocoel
- blastocyst
- blastocyst-derived
- blastocysts
- blastoderm
- blastp
- blastpgp
- blasts
- blastx
- blat
- bleeding
- blends
- bless
- blinking
Example sentences for: blastn
How can you use “blastn” in a sentence? Here are some example sentences to help you improve your vocabulary:
Sequence retrieval was initiated via BLASTN searches (default parameters- [ 37 ] ) against the BDGP http://www.fruitfly.organd GenBank http://www.ncbi.nlm.nih.govdatabases using LTRs from previously identified Drosophila retroelements as queries [ 15 ] . Results with E-values < e -10were annotated on the corresponding clone, whereupon visual inspection of several annotations confirmed the presence of retroelements proximal to known genes.
In our study, BLASTN searches using default parameters enabled us to find a high level of microsynteny without encountering any major differences between the highest-scoring matches in either TBLASTX or BLASTN searches (data not shown).
The genome-wide hit expectation value was set at E < 10 -25(BlastN) or E < 10 -15(BlastX) to filter out nonspecific high-scoring segment pairs (HSPs).
To evaluate the potential for cross-hybridization, early versions of ArrayOligoSelector used a simple BLASTN alignment identity [ 29].
Direct nucleotide sequence comparisons (BLASTN) were used for each search as this provides a more stringent test of homology between tomato and Arabidopsis sequences than do the conceptual translations of DNA sequences (TBLASTX) that can be used for less stringent comparisons between evolutionarily divergent species [ 12].
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