Example sentences for: blastn

How can you use “blastn” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • To confirm the specificity of the nucleotide sequences chosen for the primers and probes and the absence of DNA polymorphisms, BLASTN searches were conducted against the dbEST and nonredundant set of Genbank, EMBL, and DDBJ databases.

  • Independent BLASTN comparisons identified sequences having very high similarity ( E < 10 -100) to vector sequences or moderately high similarity ( E < 10 -20) to non-nuclear or non-coding sequences obtained from GenBank.

  • In addition, third position wobble causes mismatching at virtually every third base (in the coding region), leading as expected, to less identity at the DNA level [ 12 ] . In the process of collecting sequences for each HCV region, using a nucleotide level comparison algorithm like BLASTN, a lot of sequence entries will be missed.

  • Close inspection of the microsyntenic regions detected by BLASTN analysis suggested that the genomic microstructure was highly conserved in all three MSRs.

  • Sim4wrap executes a first pass using BLASTN, using the genome sequence as the query sequence and the cDNA sequences as the subject database.


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