Example sentences for: blastp

How can you use “blastp” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • None of the genes in these clusters is homologous to any of the others by BLASTP.

  • D. melanogaster sequences (SPTRreal) to the annotated peptides using BLASTP [ 22].

  • The blastp searches were run using default parameters with the expect value cut-off of 1 × 10 -8.

  • We identified genes acquired by species A after the divergence of species A and B (case +A -B -C in Figure 1), by making a BLASTP [ 28 ] query of the protein sequences more than 50 amino acids long in genome A against those in B and C. Proteins having no match with a bit score >10% of the bit score of the query protein against itself were considered as being recently acquired in species A.

  • Sequences not spanning at least 95% of the partial alignment were excluded from initial tree-building and then added back into the final free using BLASTP based similarity estimates (see Materials and methods).


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