Words similar to blastp

Example sentences for: blastp

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Similarity searches were conducted locally using the BLASTP algorithm through the Artemis interface.
We identified genes acquired by species A after the divergence of species A and B (case +A -B -C in Figure 1), by making a BLASTP [ 28 ] query of the protein sequences more than 50 amino acids long in genome A against those in B and C. Proteins having no match with a bit score >10% of the bit score of the query protein against itself were considered as being recently acquired in species A.
3) having few or no highly similar proteins (BLASTP score < 85) in other bacterial genomes
Comparison of the translated sequence to the GenBank database using the BLASTP program [ 34 ] revealed a significant match with human hnRNP A2/B1 [ 35 ] . The human and mouse proteins are identical except asparagine 287 in the human sequence was replaced by a threonine (Figure 1).
BLASTP protein similarity analyses [ 29 ] between the reference sequence and the first query sequence are performed sequentially, with each query protein compared individually to the entire protein database of the reference genome.