Example sentences for: blastx

How can you use “blastx” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • According to the criterion of E -value < e -10in BLASTX searches [ 17], only 136 of the 326 genes predict similar proteins in public databases, 71 of 326 genes matched an Arabidopsis genome sequence, and 119 genes did not have significantly similar sequence in the public databases.

  • This pipeline aligns Drosophila ESTs, cDNA sequences, and other sequences in GenBank using sim4 [ 53], performs DNA and protein sequence similarity searches of the GenBank and SwissProt/TrEMBL databases using BLASTX and TBLASTX, and executes the gene-prediction algorithms Genie [ 68] and Genscan [ 69].

  • The best match and e-value for the BLASTX search of the WMj dataset against Drosophila

  • The BLASTX program [ 45] was used to translate our set of full-length L1 DNA sequences in all three reading frames and compare them to the L1.

  • The most useful additional comparison was a BLASTX search, which compares the translated sequence of the input clone in all six frames to the peptide sequences in GenBank.


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