Words similar to blastx

Example sentences for: blastx

How can you use “blastx” in a sentence? Here are some example sentences to help you improve your vocabulary:

The best match and e-value for the BLASTX search of the WMj dataset against bacteria
In this instance, BLASTX, GenBank/EMBL/DDBJ, and cDNA records indicate that the 3' half of CG8278 should be split off as a separate gene model ( CG30350 ), while the GenBank:AF254867 record indicates that the 5' exon of CG8278 plus six other Release 2 annotations should be merged into the extensive sns annotation.
This pipeline aligns Drosophila ESTs, cDNA sequences, and other sequences in GenBank using sim4 [ 53], performs DNA and protein sequence similarity searches of the GenBank and SwissProt/TrEMBL databases using BLASTX and TBLASTX, and executes the gene-prediction algorithms Genie [ 68] and Genscan [ 69].
The exon index is an integrated table generated by a Sybase relational database, consisting of chromosome number, fingerprinted contig (FPC) ID, FPC contig order, BAC contig ID, BAC contig order, BAC contig orientation, starting position of exon on BAC contig, end position of exon on BAC contig, exon orientation, transcript orientation (available from GenBank, IMAGE, UniGene, HINT and dbEST), evidence (transcript, protein, gene prediction, ORF, Pfam), database name (Table 1), feature (poly(A) signal, CpG island, Genscan boundary), starting position on exon (or feature), end position on exon (or feature), score (BlastN, BlastX).
The BLASTX program [ 45] was used to translate our set of full-length L1 DNA sequences in all three reading frames and compare them to the L1.