Example sentences for: blastx

How can you use “blastx” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • Thus, neither Genie nor GENSCAN correctly predicted the structure of these two genes; each correctly predicted aspects of the gene models, but EST and BLASTX data were necessary to accurately determine the structure of the two genes.

  • To detect proteins with significant sequence similarity, we used BLASTX to compare translated genomic sequence to peptides in other species included in SWALL [ 13, 83], and TBLASTX to compare translated genomic sequence to virtual translations of the rodent UniGene set [ 84] and insect sequences in dbEST [ 69].

  • The genome-wide hit expectation value was set at E < 10 -25(BlastN) or E < 10 -15(BlastX) to filter out nonspecific high-scoring segment pairs (HSPs).

  • To examine this latter possibility contig consensus sequences with and without BLASTX homology were examined to determine their longest open reading frame (ORF).

  • The best match and e-value for the BLASTX search of the WMj dataset against Drosophila


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