Example sentences for: blat

How can you use “blat” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • To test whether a human region in a CSE encoded a pseudogene, we used the human genomic DNA region of this CSE to search the whole human genome with BLAT.

  • The bioinformatics group at Biogen has been using Apollo to examine alignments, executed with BLAT, between their internal data and the public human genomic sequence (X.

  • This conclusion is supported by unique BLAT assignment of the probe sequence to the human genome [ 29 ] .

  • BLAT was used to match all mouse mRNA sequences and BAC sequences to both mouse assemblies with the default parameter setting.

  • We used regions of amino acid sequence conserved between the midasin genes in yeast and Schizosaccharomyces pombe to make a rough map of the gene onto the August 2001 freeze of the assembled human genome with the public domain Blat server at http://genome.ucsd.edu/index.html [ 54 55 ] . The resultant partial nucleotide sequence identified about four-fifths of the exons and was used to design the requisite PCR primers to verify all exon-intron boundaries in the gene by physical sequencing of appropriate PCR-amplified cDNA fragments.


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