Words similar to blastclust
Example sentences for: blastclust
How can you use “blastclust” in a sentence? Here are some example sentences to help you improve your vocabulary:
Protein secondary structure was predicted using a multiple alignment as the input for the JPRED and PHD programs [ 42 43 44 ] . Preliminary clustering of proteins was done using the BLASTCLUST program with empirically determined length and score threshold cut off values (For documentation see ftp://ftp.ncbi.nih.gov/blast/documents/README.bcl).
Protein secondary structure was predicted using a multiple alignment as the input for the JPRED and PHD programs [ 39 40 ] . Preliminary clustering of proteins was done using the BLASTCLUST program with empirically determined length and score threshold cut off values (For documentation see ftp://ftp.ncbi.nih.gov/blast/documents/README.bcl).
Homologs recovered in the searches were collated and clustered at various thresholds of BLAST-bit-score to HSP-length ratios using the BLASTCLUST program [ 67].
The encoded amino-acid sequences were clustered at 99% similarity threshold using BLASTCLUST [ 30] to remove redundant sequences.
The monophyletic clusters that emerged in this analysis were essentially the same as those that were derived through similarity based clustering using BLASTCLUST.