Words similar to secondary-structure

Example sentences for: secondary-structure

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Additionally, secondary-structure prediction for the proposed PAS region using PHD indicated that this region is largely unstructured.
The hybrid-fold-recognition method, which combines sequence-profile analysis with alignment-based secondary-structure prediction [ 22] and the 3D-PSSM method [ 23] both suggested a likely α-amylase-like triosephosphate isomerase (TIM) barrel structure for this protein family.
To gain a better understanding of the functions and evolution of these regulatory proteins, we initiated a detailed analysis of their sequences using position-specific-score matrix searches, sequence-structure threading, secondary-structure prediction and structure comparisons.
Interestingly, the blocks of homology defined for the yCCR4-related proteins all correspond to secondary-structure elements (β-strand or α-helix) which form the core of AP endonucleases (Fig.
Secondary-structure prediction using the Jpred method [ 19], with a multiple alignment of the KilA-N domain used as the input, pointed to an α + β fold with four conserved strands and at least two conserved helices.