Example sentences for: protdist

How can you use “protdist” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • The PROTDIST and FITCH programs are modules of the PHYLIP software package [ 31].

  • Phylogenetic trees were generated using ClustalX (for neighbor joining) and PHYLIP (for neighbor joining, parsimony and maximum likelihood using Protdist, Protpars, and ProML, respectively).

  • The distance matrix used in the latter programs was produced using the program Protdist with a Dayoff PAM matrix.

  • The distance matrix was obtained using Protdist with a Dayhoff Pam matrix.

  • Phylogenetic trees were constructed by first generating a distance matrix using the PROTDIST program and the Dayhoff PAM model for amino-acid substitutions and employing this matrix for minimum evolution (least-square) tree building [ 30] using the FITCH program.


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