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Example sentences for: tsss

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At threshold 0.8, 1,232 TSSs referring to 1,176 (55.
To retrain the McPromoter system, we used the newly determined TSSs, and extracted 250 bp upstream and 50 bp downstream of each TSS as training sequences.
Because of the large number of genes with more than one annotated 5' end, which often lie closely together, we did not evaluate success on the level of individual TSSs, but rather on the level of genes; that is, if at least one prediction falls within the positive region of any of its annotated start sites, it is considered as positive hit.
The next step is to optimize both the threshold we use for predicting the TSSs and the window size we use for assessing their correlation with 5' EST ends.
As described above, we applied very strict criteria for identifying the 1,941 TSSs used in our training set.