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Example sentences for: tsss

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At threshold 0.8, 1,232 TSSs referring to 1,176 (55.
Many Drosophila genes have large introns in their 5' UTRs and these introns may not be detected if the cDNA clone from which the EST is derived is not full length; this will lead to frequent placement of the annotated TSSs too close to the ORF.
To retrain the McPromoter system, we used the newly determined TSSs, and extracted 250 bp upstream and 50 bp downstream of each TSS as training sequences.
To assess the quality of our inferred TSSs, we aligned the 1,941 300 bp sequences against sequences flanking the TSSs in the DPD and CPD using BLAST [ 23].
These motifs are known to have largely fixed locations relative to the TSS, and the tight distribution in the locations of the motifs we observe (Figure 1) implies that the TSSs in our core promoter set have been accurately mapped.