Words similar to tsdfinder

Example sentences for: tsdfinder

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the scoring scheme for TSDfinder was revised during its development to assign a scoring penalty to TSDs less than 12 nucleotides long.
For each L1 found, the program TSDfinder [ 33] was used to refine the location coordinates in the following ways.
These TSDs were selected by the TSDfinder program in part because the 3' TSD was preceded by a poly(A) tail (see Materials and methods).
In the TSDfinder program [ 33] written in Perl [ 56], L1 coordinates were parsed from the RepeatMasker results in the *.out file.
Implementation of TSDfinder on a genome-wide scale has provided new insights to a variety of hypotheses about L1 insertion and evolution.