Example sentences for: tsdfinder

How can you use “tsdfinder” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • To exclude the possibility that the abundance of the 11-20-nucleotide long TSDs in our collection is exclusively a result of this aspect of the scoring scheme, TSDfinder analysis of this dataset was repeated without rewarding a higher value to TSDs of length > 10 nucleotides, and the distribution of TSD lengths remained generally unchanged.

  • An important step for the validation of TSDfinder results was the analysis of the TSDs identified by the algorithm.

  • When a microhomology existed between the poly(A) tail and the TSD, the microhomologous region was arbitrarily considered part of the TSD by TSDfinder (Figure 1c).

  • In the TSDfinder program [ 33] written in Perl [ 56], L1 coordinates were parsed from the RepeatMasker results in the *.out file.

  • To facilitate this study, we wrote the software TSDfinder, which identifies the TSDs, poly(A) tails, and inversion breakpoints (if any) associated with L1s.


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