Words similar to tsdfinder

Example sentences for: tsdfinder

How can you use “tsdfinder” in a sentence? Here are some example sentences to help you improve your vocabulary:

The longest TSD found was 60 nucleotides even after we relaxed and extended the TSDfinder parameters to enable the identification of long TSDs.
For each L1 found, the program TSDfinder [ 33] was used to refine the location coordinates in the following ways.
Finally, we observed that for two of the L1-TDs that do not have a polyadenylation signal, the sequence that the TSDfinder program defined as the poly(A) tail is 'patterned'; that is, the tail is composed of A-rich simple repeats (for example, AAATAAAT.
This finding, combined with generally high TSD scores and manual inspection of hundreds of L1s recovered, gives us confidence that the sequences identified by the TSDfinder algorithm represent actual TSDs.
In the TSDfinder program [ 33] written in Perl [ 56], L1 coordinates were parsed from the RepeatMasker results in the *.out file.