Words similar to tsd

Example sentences for: tsd

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We manually inspected these sequences for the presence of either AATAAA or ATTAAA polyadenylation signals no more than 100 nucleotides upstream of the poly(A) tail that preceded the 3' TSD [ 43 ] . We were able to identify a polyadenylation signal in 11 of our 25 examples of 3' transduction events (Table 2and Figure 3a).
This sequence was used to analyze the nucleotide neighborhood of each L1 insertion for which the TSD score was ≥ 100.
TSD scoring scheme
These L1s had TSDs at least nine nucleotides long preceded by poly(A); they were classified as L1-TDs on the basis of having at least 20 nucleotides of sequence between the end of the 3' UTR and the start of the poly(A) tail that immediately preceded the 3' TSD.
In cases where multiple TSDs were identified, TSDs with the best score and with a candidate poly(A) tail immediately preceding the 3' HSP were defined as the TSD for a particular L1 insertion.