Words similar to topology
Example sentences for: topology
How can you use “topology” in a sentence? Here are some example sentences to help you improve your vocabulary:
Comparative analyses have strongly suggested that these phenomena make major contributions to genome evolution, at least in prokaryotes [ 7 22 23 24 25 ] . These phenomena have the potential to severely affecting phylogenetic tree topology, particularly when similar sets of genes are lost indifferent lineages because of similar environmental pressures, or when a preferential trend of horizontal gene flow exists between different lineages.
This domain contains a 4-stranded sheet with a β2-α-β2 topology, with the strands in a 2-1-4-3 order.
Using the experimentally determined structure as a guide, we split the β and β' subunits of the Thermus thermophilus DDRP and the largest two subunits of the yeast DDRP into individual globular domains and investigated them by visual inspection of the topology, structural searches of the PDB database using the DALI program and iterative searches of the NR database using PSI-BLAST.
The tree topology supports the findings reported above in that the sequences cluster into three distinct groups, with the cyanobacterial sequences being most closely associated with the group 3 (plant and alpha-proteobacteria) sequences.
This tree topology suggests HGT between bacteria and eukaryotes, possibly a relocation of the fused gene from the pro-mitochondrion to the eukaryotic nuclear genome or, alternatively, gene transfer from eukaryotes to proteobacteria.
Loading...