Words similar to topology

Example sentences for: topology

How can you use “topology” in a sentence? Here are some example sentences to help you improve your vocabulary:

Using the experimentally determined structure as a guide, we split the β and β' subunits of the Thermus thermophilus DDRP and the largest two subunits of the yeast DDRP into individual globular domains and investigated them by visual inspection of the topology, structural searches of the PDB database using the DALI program and iterative searches of the NR database using PSI-BLAST.
Parsimony, likelihood, and distance methods all resulted in trees with the same topology.
Hence, evolutionary hypotheses that depend crucially on the sign of epistasis, including certain theories on the evolution of recombination [ 12 13 14 15 ] and on the speed of mutation accumulation in asexual populations [ 16 17 18 ] , will also depend on the density distribution of fit genotypes, and on the topology of those regions of genotype space into which populations move under the pressures of mutation and selection.
The ASCR fold has a β2-α-β2-α topology and forms a two-layered structure with a 4-stranded β-sheet and characteristic strand order of 1-2-4-3 (Fig.
Fold predictions were done using the 3-D position specific score matrix (3DPSSM) [ 43 ] and the Hybrid fold method [ 44 ] . Phylogenetic analysis was carried out using the neighbor-joining algorithm, with subsequent local rearrangements using the maximum likelihood algorithm [ 45 ] . The robustness of tree topology was assessed with 10000 Resampling of Estimated Log Likelihoods (RELL) bootstrap replicates.