Example sentences for: topology

How can you use “topology” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • To further assess the robustness of the obtained tree, we varied the parameters of the included conserved pairs by allowing distances between the genes comprising a pair from 0 to 5 and changing the minimal number of genomes, in which a conserved gene pair had to be present, from 2 to 4. These changes did not significantly affect the tree topology (data not shown).

  • Visual examination of the topology and searches of the PDB database using the DALI program showed that this insert domain has the β-grasp fold [ 80 81 ] . For example, in the DALI search, the

  • None of the categories shows a preference for a particular tree topology.

  • Phylogenetic analysis was performed by using the PAUP 4.0 program [ 39 ] , with 1000 bootstrap replicates performed to assess the reliability of the tree topology.

  • The tree topology supports the findings reported above in that the sequences cluster into three distinct groups, with the cyanobacterial sequences being most closely associated with the group 3 (plant and alpha-proteobacteria) sequences.


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