Words similar to thra
Example sentences for: thra
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Similarly, the distribution of D values for the comparison of the proteomic thrA and thrB sequences is also represented in Figure 4, alongside with the null model, Eq. 11, for its dimensionality ( n = log 2 ( uu = 20 possible aminoacids) = 4.32 ), which is graphically nearly undistiguishable from that of the comparison between the stanzas, with n = log 2 ( uu = 19 possible letters) = 4.25 (dotted gray line for the rounded value, n = 4.3).
Examples are the bifunctional proteins ThrA (aspartokinase I and homoserine dehydrogenase I) and MetL (aspartokinase II and homoserine dehydrogenase II) where only the amino-terminal modules representing the kinase activities have been identified on the basis of their sequence similarity to the E. coli unimodular aspartokinase III (LysC).
The genomic sequences of thrA and thrB were translated into proteomic sequences using SwissProt's on line translator, applied to the 5'3' first frame http://www.expasy.ch/tools/dna.html.
For the analysis of this figure it is noteworthy to recall that the statistical properties of prokaryote DNA are often undistinguishable from uniform randomness [ 12 18 19 ] . The genomic sequence of the first gene of the threonine operon of E. coli, thrA, is compared with that of the second, thrB.
In the preceding report the authors have illustrated the properties of unidirectional n-metric estimation of similarity for the threonine operon of E. coli [ 12 ] . The same two two regions of thrA and thrB sequences of E. coli K-12 MG1655 are compared in Figure 5to highlight the advancement achieved by USM.
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