Words similar to synechocystis
Example sentences for: synechocystis
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Only when two low GC Gram positives were included in the same quartet, was the intra-phylum grouping of low GC Gram positives supported by many more QuartOPs than the grouping of B. subtilis with Synechocystis sp. (genome quartets #51 and #52).
Neisseria meningitidis (Neime), Pasteurella multocida (Pasmu), Psudomonas aeruginosa (Pseae), Rickettsia prowazekii (Ricpr), Staphyloccocus aureus (Staau), Streptococcus pyogenes (Strpy), Synechocystis PCC6803 (SynPC), Thermotoga maritima (Thema), Treponema pallidum (Trepa), Ureaplasma urealyticum (Ureur), Vibrio cholerae (Vibch), Xylella fastidiosa (Xylfa), and ten archaea: Aeropyrum pernix (Aerpe), Archaeoglobus fulgidus (Arcfu), Halobacterium sp. (Halsp), Methanobacterium thermoautotrophicum (Metth), Methanococcus jannaschii (Metja), Pyrococcus horikoshii (Pyrho), Pyrococcus abyssi (Pyrab), Sulfolobus solfataricus (Sulso), Thermoplasma acidophilum (Theac), Thermoplasma volcanium (Thevo).
The strengths of these Synechocystis arrays include: 1.) consistent and high DNA concentrations in each of over 11,000 spots per array; 2.) 3 replicates per probe per slide; and 3.) high signal-to-noise ratio.
This organism is a widely used experimental model for the study of gene expression and plant-like oxygenic photosynthesis [ 7 ] . Synechocystis PCC6803 was predicted to contain 3,168 open reading frames (prior to May 2002) http://www.kazusa.or.jp/cyano/index.html [ 8 ] . Of these, over 50% (>1700 ORFs) have been characterized as hypothetical or having no similarity to known sequences.
To test for the possibility that long branch attraction [ 48 ] might be the reason for the strong support of Halobacterium sp. grouping with Synechocystis sp., we repeated the analysis replacing the Halobacterium sp. genome with that from Archaeoglobus fulgidus , another archaeon.
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