Words similar to synechococcus
Example sentences for: synechococcus
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In each case Prochlorococcus marinus and Synechococcus species are the outlying sequence group, with the other cyanobacterial sequences ( Nostoc punctiforme and Anabaena species) being closer to the higher plant sequences from A. thaliana and corn ( Zea mays ). The order of branching shown is supported by very high bootstrap values.
The tree of SSU sequences shows the two proteobacteria ( P. stutzeri and M. loti ) at one end of the tree with cyanobacteria ( Synechococcus sp. and Synechocystis sp.) and mycobacteria ( M. leprae and M. tuberculosis ) clades branching off from a common node (Figure 4).
For all of the operonic Anabaena/Nostoc Trp-pathway proteins used as queries, homolog sequences from other cyanobacteria ( Synechocystis, Synechococcus, Prochlorococcus ) were the remaining top hits returned in the BLAST queue.
Synechocystis/Synechococcus/Prochlorococcus
As BLAST hits must be considered imperfect indicators of nearest-neighbor homologs [ 38], the conclusion that the operonic trp -pathway genes are of cyanobacterial lineage origin was confirmed more rigorously by examination of extensive trees (available upon request) constructed for each trp protein of Anabaena and Nostoc . For the Trp-pathway proteins, all the cyanobacterial proteins clustered together, regardless of whether they were Anabaena or Nostoc paralogs or whether they were the singly represented proteins of Synechocystis, Synechococcus , or Prochlorococcus . The same result was obtained for AroA Iβ protein trees.
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