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Example sentences for: sequences

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This tool attempts to match the 5' and 3' partial sequences of a clone insert with the sequences of all other IMAGE clone inserts, as well as with all RefSeq reference sequences [ 7 ] . If matches are found, the entire clone insert sequence may then be constructed by piecing together overlapping matches of the contiguous sequences.
Protein alignments were generated using the Clustal X program and checked manually [ 40 ] . SSU NA sequences were aligned using Clustal W as implemented by the OMIGA package and checked manually [ 41 42 ] . NA alignments of full-length moeZ sequences for indel analysis were aligned manually based on the Clustal X protein sequence alignment.
Upon close inspection, we consider three sequences as genuine pseudogenes: NIP3;1-pseudo, NIP2;1-pseudo, and TIP2;x-pseudo (Table 2; Figure 5a,b,c).
Sequences categorized as matched to EST data have a high degree of similarity (a score over 100) to reported sequence information, but the previously collected sequence data was not associated with a known function.
BLAST analyses were carried out for both the Bnum- and the Magnum-derived protein sequences.