Words similar to psi-blast
Example sentences for: psi-blast
How can you use “psi-blast” in a sentence? Here are some example sentences to help you improve your vocabulary:
Among them, BLAST and PSI-BLAST [ 3] are widely used to assign functions to newly sequenced open reading frames (ORFs) in genome sequence.
I used BLAST [ 11 ] and PSI-BLAST at the NCBI website to find K +-channel homologs using the Shaker K +-channel pore sequence as a query initially and then other, longer, K +-channel family-specific query sequences for verification.
All globular segments of proteins that did not map to domains with previously constructed PSSMs were searched individually using PSI-BLAST to detect any additional domains that may have been overlooked.
The PSSMs were prepared by choosing one or more starting queries (seeds) for a set of most frequently encountered domains (see reference [ 28] for details) and run against the NR database until convergence with the -C option of PSI-BLAST to save the PSSM.
The protein family retrieved by PSI-BLAST [ 25] consists of 20 unique.