Words similar to psi-blast

Example sentences for: psi-blast

How can you use “psi-blast” in a sentence? Here are some example sentences to help you improve your vocabulary:

For example, A. thaliana has at least three superfamily members in the PSI-BLAST output, including carbamoyl phosphate synthetase, 3-methylcrotonyl-CoA carboxylase, and acetyl CoA carboxylase.
Multiple sequence alignments were constructed using the T_Coffee program [ 35], followed by manual correction based on the PSI-BLAST results.
After multiple iterations, a PSI-BLAST search using the E. coli GshB (gi121663) as an initial query sequence found 509 sequences of enzymes in the ATP-grasp superfamily, to which the bacterial enzyme is known to belong, but no eukaryotic GshB sequences.
Among them, BLAST and PSI-BLAST [ 3] are widely used to assign functions to newly sequenced open reading frames (ORFs) in genome sequence.
The PSSMs were prepared by choosing one or more starting queries (seeds) for a set of most frequently encountered domains (see [ 34] for details) and run against the NR database until convergence with the -C option of PSI-BLAST to save the PSSM.