Words similar to psi-blast

Example sentences for: psi-blast

How can you use “psi-blast” in a sentence? Here are some example sentences to help you improve your vocabulary:

For example, A. thaliana has at least three superfamily members in the PSI-BLAST output, including carbamoyl phosphate synthetase, 3-methylcrotonyl-CoA carboxylase, and acetyl CoA carboxylase.
We prepared a multiple alignment of these regions from all the proteins detected in these searches (Figure 1) and used it to construct a PSI-BLAST position-specific score matrix (PSSM) [ 34] and a hidden Markov model [ 35] for further searches against the complete or nearly complete proteome databases of individual eukaryotes.
In fact, members of the ATP-grasp superfamily that catalyze comparable reactions (that is, GshBs (see further below), ribosomal S6 modification enzymes, D-Ala-D-Ala ligases) are sufficiently well conserved to be easily detected by PSI-BLAST, even though they utilize different substrates [ 36].
To further investigate its evolutionary relationships, we used the sequence of this β-barrel unit from the PRC-H protein (gi: 132177, residues 151-257) of Rhodopseudomonas viridis in a PSI-BLAST [ 21] search of the non-redundant (NR) database at the National Center for Biotechnology Information (NCBI).
Sequence profile searches were performed using the PSI-BLAST program [ 22]; profiles were saved using the -C option and retrieved using the -R option.