Example sentences for: psiblast

How can you use “psiblast” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • PSIBLAST searches often reveal areas of local similarity in proteins that have no significant overall sequence identity.

  • Kir7 was selected because it is the Kir subfamily most distant from the other Kir subfamilies, as indicated in Table 1. Of the different K +channel families, KirBac's were found to be most similar to the Kir superfamily in the PsiBlast searches primarily because of the homology of their similar, relatively long C-terminal sequences following the M2 segments.

  • A PSIBLAST search, using huAPE1 as the founder sequence, with an e-value of 0.1 per iteration, did not converge after 6 iterations, but few new sequences were added in the last 2 cycles.

  • The methodology can be used to complement searches with programs such as PSIBLAST and PROSITE [ 41 ] to detect distantly related functional or structural homologues in sequences revealed by genome sequencing.

  • Sequence searches were performed with the web-based programs Blast and PsiBlast at http://www3.ncbi.nlm.nih.gov/BLAST/for sequences that were deposited in data bases and by tblastn at http://www.ncbi.nlm.nih.gov/MicrobJ3last/unfinishedgenome.htmlfor unpublished microbial sequences.


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