Words similar to psiblast
Example sentences for: psiblast
How can you use “psiblast” in a sentence? Here are some example sentences to help you improve your vocabulary:
PSIBLAST searches often reveal areas of local similarity in proteins that have no significant overall sequence identity.
Kir7 was selected because it is the Kir subfamily most distant from the other Kir subfamilies, as indicated in Table 1. Of the different K +channel families, KirBac's were found to be most similar to the Kir superfamily in the PsiBlast searches primarily because of the homology of their similar, relatively long C-terminal sequences following the M2 segments.
A PSIBLAST search, using huAPE1 as the founder sequence, with an e-value of 0.1 per iteration, did not converge after 6 iterations, but few new sequences were added in the last 2 cycles.
The methodology can be used to complement searches with programs such as PSIBLAST and PROSITE [ 41 ] to detect distantly related functional or structural homologues in sequences revealed by genome sequencing.
Sequence searches were performed with the web-based programs Blast and PsiBlast at http://www3.ncbi.nlm.nih.gov/BLAST/for sequences that were deposited in data bases and by tblastn at http://www.ncbi.nlm.nih.gov/MicrobJ3last/unfinishedgenome.htmlfor unpublished microbial sequences.