Words similar to pfam-
Example sentences for: pfam-
How can you use “pfam-” in a sentence? Here are some example sentences to help you improve your vocabulary:
Our studies on amino-acid distribution and patterns were conducted on Pfam-A families.
In this study, the following databases were used: SWISS-PROT (release 39 and updated to 19 December, 2000) [ 16], which contains 91,132 protein entries; Pfam (release 6.1) [ 15], which contains 2,727 protein families in Pfam-A and 40,230 families in Pfam-B; Proteome Analysis Database [ 28], where complete non-redundant proteomes were downloaded.
We analyzed 168 Pfam-A families with more than 20 members and generated consensus sequences with their sequence logos of all aligned sequences in these families using the Alpro sequence logo program [ 19].
These domains were then classified into 231 Pfam-A and 318 Pfam-B families either by direct SWISS-PROT ID matching or by sequence similarity matching using FASTA [ 18].
The procedure used to classify polytopic membrane domains is based mainly on family classification schemes (Pfam-A and Pfam-B) and is shown in Figure 1a.