Words similar to pfam-

Example sentences for: pfam-

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Unmatched domains are further classified on the basis of Pfam's classification, and additional 48 Pfam-A and 166 Pfam-B families are identified (small size Pfam-B families with no less than four members and no less than three matches are selected).
In total, we identified 231 Pfam-A and 318 Pfam-B families as polytopic membrane domains.
Pfam Version 6.3 (released on May, 2001) contains alignments and models for 2847 protein families, based on the Swiss-Prot 39 and SP-TrEMBL 14 protein sequence databases [ 29 ] . Pfam was downloaded from ftp://genetics.wusti.edu/pub/eddy/pfam-6.
We also analyzed Pfam-B and the clustered families, but found fewer conservations, probably because the Pfam-B and the clustered families are not as carefully aligned as Pfam-A families.
We also carried out the same kind of analysis on Pfam-A families that are annotated as transporters, symporters, and channels, and found that 12-TM-helix families are preferred by transporter-like families.