Words similar to pfam

Example sentences for: pfam

How can you use “pfam” in a sentence? Here are some example sentences to help you improve your vocabulary:

This requires specially prepared Pfam full alignments and profile HMMs that are created with the HMMER software as follows:
(ii) Some Pfam families are composed solely of sequences originating from closely related (or the same) species (such as PF02362, the B3 DNA binding domain of higher plants).
Input: Original Pfam full alignment A .
The following databases were used: Human UTR-DB (EBI) (version 13) [ 70]; Human Transcript Database (Baylor University) (version 1) [ 71]; GenBank CDS (NCBI) (only PRI mRNA sequences were used, version 119) [ 72]; HINT (Ohio State University) [ 73]; EST Assembly Project (University of Washington) [ 74]; TIGR Human Gene Index (version 4.5) [ 75]; dbEST (NCBI) (version 119) [ 76]; MINT and RINT (Ohio State University) [ 73]; EMBL Rodent (EMBL) (version 63) [ 77]; SWISS-PROT (EMBL) (version 39) [ 78]; TrEMBL (EMBL) (version 14) [ 78]; PIR (MIPS-JIPID) (version 65) [ 79]; and Pfam (Sanger Centre) (version 5.4) [ 80].
To do this correctly, the aligned query sequence has to be bootstrap resampled in exactly the same way as was used for precalculating the pairwise distances of the Pfam alignment.