Words similar to nr
Example sentences for: nr
How can you use “nr” in a sentence? Here are some example sentences to help you improve your vocabulary:
3 nM) that resembled that of ERβ binding to the GRIP1 NR box region (amino acids 610-770).
Thus, ERβ binds the N-CoR C-terminal NR interacting region in the presence of agonists, but not SERMs, and does so in vitro and in mammalian cells.
Other highly homologous genes of RPS10 are RPS5, RPS9, RPS29, RPL5, RPl27a, and RPL28 [ 26 ] . FLJ12671s a hypothetical gene with an unknown function identified by the NEDO human cDNA-sequencing project [ 27 ] . Blasting the FLJ12671 sequence against the nr database also identified hits on chromosomes 1 and 11, suggesting that this gene has been duplicated on several chromosomes.
The non-redundant (NR) database of protein sequences (National Center for Biotechnology Information, NIH, Bethesda) was searched using the BLASTP program [ 100 ] . Position-specific scoring matrix (PSSM) searches were conducted using the PSI-BLAST program, typically with a PSSM inclusion expectation (E) value threshold of 0.01, and were iterated until convergence [ 100 101 ] . Prior to PSI-BLAST searches, query sequences were evaluated for compositional bias using the SEG program [ 102 ] . If no such bias was detected, searches were run with the composition-based statistics turned off, in order to maximize sensitivity [ 103 ] . Multiple alignments of protein sequence were constructed using the T_Coffee program [ 104 ] , followed by manual correction based on the PSI-BLAST results.
The PSSMs were prepared by choosing one or more starting queries (seeds) for a set of most frequently encountered domains (see reference [ 28] for details) and run against the NR database until convergence with the -C option of PSI-BLAST to save the PSSM.
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