Words similar to non-synonymous

Example sentences for: non-synonymous

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Comparison of the levels of synonymous (amino-acid preserving) and non-synonymous (amino-acid altering) nucleotide mismatches, between hits containing unverifiable stop codons or frameshift mutations and the most similar registered EPK, was used to identify additional probable pseudogenes and sequencing artifacts.
Likewise, the oriC region in M. paratuberculosis was found to share a high level of nucleotide identity (~98%) with M. avium . Calculation of the rates of total nucleotide diversity (3) and synonymous substitution per synonymous site (ds) and non-synonymous substitution per non-synonymous site (dn) revealed patterns of variation within the range observed from sequence data outside the oriC region.
The data was analyzed using the DNAStar (Madison, WI) package and Artemis [ 15 ] . Rates of synonymous and non-synonymous substitution were calculated by the un-weighted method of Nei and Gojobori [ 27 ] . Pustell DNA matrix analysis [ 25 ] was performed using MacVector version 7.1 software.
In contrast, the rates of non-synonymous substitution per non-synonymous site were 1.89% ± 0.05% (range, 0% to 12.
For each orthologous gene set, pairwise estimates of the synonymous (K s ) and non-synonymous (K a ) substitution rates were obtained from nucleotide-coding sequence alignments using the Pamilo-Bianchi-Li method [ 34, 35] implemented in the PBLtest program (I.B.R.