Words similar to non-synonymous
Example sentences for: non-synonymous
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Likewise, the oriC region in M. paratuberculosis was found to share a high level of nucleotide identity (~98%) with M. avium . Calculation of the rates of total nucleotide diversity (3) and synonymous substitution per synonymous site (ds) and non-synonymous substitution per non-synonymous site (dn) revealed patterns of variation within the range observed from sequence data outside the oriC region.
These calculations showed a high degree of similarity between the two sequences and a predominance of synonymous over non-synonymous substitutions (Fig.
For each orthologous gene set, pairwise estimates of the synonymous (K s ) and non-synonymous (K a ) substitution rates were obtained from nucleotide-coding sequence alignments using the Pamilo-Bianchi-Li method [ 34, 35] implemented in the PBLtest program (I.B.R.
In conclusion, there are estimated to be 30,000 non-synonymous differences between an individual and the draft genome [ 23 5 7 8 9 ] . Determination of which positions are likely to be disease associated is a challenging and important problem.
For each of those genes, all known non-synonymous mutations were then downloaded with the cDNA sequence for that gene.