Words similar to meme

Example sentences for: meme

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Using the ZAS-N- and ZAS-C-selected DNA sequences as input, the MEME program discovered motifs containing sequences similar to the κB or Sb transcriptional enhancer motifs as well as the conserved heptamer or nonamer elements of the RSS.
We next looked for over-represented motifs using the MEME system to analyze the core promoter regions from -60 to +40 on the leading strand ([ 24, 25] and see Materials and methods).
MEME uses the iterative expectation-maximization algorithm to identify conserved ungapped blocks in a set of query sequences, and delivers weight matrix models of the found non-overlapping motifs.
To try and identify novel sequences conserved in these promoters, we used the motif-finding algorithm MEME [ 56], initializing the EM algorithm with the most significantly enriched 6mer for the cluster.
0) when analyzed by MEME under the same settings (data not shown).