Example sentences for: megablast

How can you use “megablast” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • MEGABLAST parameters were set to take advantage of the lower-case masking, which allows for alignment extension (but not alignment seeding) through lower-case masked sequences.

  • The MEGABLAST output was parsed into tab-delimited text and displayed using the graphical alignment display program Parasight (Jeff Bailey, unpublished work).

  • B6 sequences were retrieved from the mmtrace database at NCBI using a MegaBLAST search, and D2 sequences were retrieved from Celera by BLAST search of the All Mouse Fragments (masked) database.

  • The approximately 1 Mb (1,008,705 base-pairs (bp)) interval encompassing the entire pericentric inversion breakpoint interval and the adjacent unique (that is, present on only one chromosome arm in PTR) FISH probes was extracted from the November 2002 human genome assembly and compared to the entire genome using MEGABLAST.

  • A "seed" sequence was found in C. intestinalis gDNA, Ti 119616831 ( Supplemental Table 1), by a MegaBLAST search using nucleotide sequence encoding exon 3 of SpRunt in the NCBI Trace server site http://www.ncbi.nlm.nih.gov/blast/mmtrace.html.


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