Words similar to megablast
Example sentences for: megablast
How can you use “megablast” in a sentence? Here are some example sentences to help you improve your vocabulary:
The MEGABLAST tool [ 17] was used to identify the approximate genomic coordinates for each UniGene cluster (for example, the contig on which a given gene appeared to be located).
For efficient MEGABLAST analysis, the human genome sequence is fragmented into 400 kb pieces, each chromosome is fractioned separately and each fragment labeled consecutively from p-telomere to q-telomere.
We extracted the 1 Mb interval from the November 2002 human genome assembly and performed a sequence-similarity search against the entire human genome (build 31 (Figure 4) and the non-redundant nucleotide (NT) and high throughput genomic sequence (HTGS) databases (data not shown)) using MEGABLAST.
B6 sequences were retrieved from the mmtrace database at NCBI using a MegaBLAST search, and D2 sequences were retrieved from Celera by BLAST search of the All Mouse Fragments (masked) database.
MEGABLAST parameters were set to take advantage of the lower-case masking, which allows for alignment extension (but not alignment seeding) through lower-case masked sequences.