Example sentences for: megablast

How can you use “megablast” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • The approximately 1 Mb (1,008,705 base-pairs (bp)) interval encompassing the entire pericentric inversion breakpoint interval and the adjacent unique (that is, present on only one chromosome arm in PTR) FISH probes was extracted from the November 2002 human genome assembly and compared to the entire genome using MEGABLAST.

  • MEGABLAST parameters were set to take advantage of the lower-case masking, which allows for alignment extension (but not alignment seeding) through lower-case masked sequences.

  • B6 sequences were retrieved from the mmtrace database at NCBI using a MegaBLAST search, and D2 sequences were retrieved from Celera by BLAST search of the All Mouse Fragments (masked) database.

  • To assess the quality of directional cloning in EST libraries, we applied the MEGABLAST tool [ 17] to align ESTs to the BOU of the UniGene cluster to which they belonged.

  • The MEGABLAST tool [ 17] was used to identify the approximate genomic coordinates for each UniGene cluster (for example, the contig on which a given gene appeared to be located).


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