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Example sentences for: hth

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The majority of the domains with which the KilA-N and Bro-N domains combine in multidomain proteins are restricted to proteins encoded by temperate bacteriophages and large eukaryotic DNA viruses (the exceptions are a few domains that are common in cellular proteomes, such as HTH, CCCH and RING finger).
Additionally, Bro-N domains show specific combinations with certain domains, such as HTH and the Vsr-superfamily endonuclease.
The classic helix-turn-helix (HTH)-domain proteins, which govern the switch between the lysogenic and lytic pathways of temperate bacteriophages, and repressors containing the MetJ/Arc domain are well-known examples of such regulatory DNA-binding proteins in prokaryotic virus-host systems [ 4, 5, 6, 7, 8].
Compared to the Ahab predictions, we find more modules near homeotic genes (Abd-A, abd-B, Ubx, hth), due to the presence of the novel Gibbs motifs.
Previously, it had been proposed that the APSES domains were related either to the winged HTH or to the basic helix-loop-helix (bHLH) domains [ 16, 17, 24].