Words similar to genscan
Example sentences for: genscan
How can you use “genscan” in a sentence? Here are some example sentences to help you improve your vocabulary:
The outer (gray) panel displays computational evidence to support these annotations, such as gene predictions generated by programs such as GenScan [ 44] and Genie [ 45], and other biological data, such as ESTs aligned using the program Sim4 [ 2] and protein homologies revealed by BLASTX [ 1].
To balance the false-positive and false-negative rates of GENSCAN, we used an empirical prediction score as a threshold, as done previously [ 44].
EST evidence and BLASTX homology to other fly proteins indicated that this gene should be split into two three-exon genes, CG32054 and CG32053 . One 5' UTR exon and one protein-coding exon in CG32053 were missed by both Genie and GENSCAN.
In the annotation of the masked scaffold, Genscan predicted a single gene model that includes all but one rolled coding exon, and protein similarity evidence supported the exon that Genscan missed.
Incorporating their methods (threading GENSCAN predictions to look for structural homology) into our computational approach may uncover additional missed genes.