Example sentences for: genscan

How can you use “genscan” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • The outer (gray) panel displays computational evidence to support these annotations, such as gene predictions generated by programs such as GenScan [ 44] and Genie [ 45], and other biological data, such as ESTs aligned using the program Sim4 [ 2] and protein homologies revealed by BLASTX [ 1].

  • To balance the false-positive and false-negative rates of GENSCAN, we used an empirical prediction score as a threshold, as done previously [ 44].

  • EST evidence and BLASTX homology to other fly proteins indicated that this gene should be split into two three-exon genes, CG32054 and CG32053 . One 5' UTR exon and one protein-coding exon in CG32053 were missed by both Genie and GENSCAN.

  • In the annotation of the masked scaffold, Genscan predicted a single gene model that includes all but one rolled coding exon, and protein similarity evidence supported the exon that Genscan missed.

  • Incorporating their methods (threading GENSCAN predictions to look for structural homology) into our computational approach may uncover additional missed genes.


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