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Example sentences for: genprotec

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The functional assignments of the E. coli gene products in the November 97 GenBank U00096 deposit represented an accumulation of information retrieved from the literature (collected in the GenProtEC and EcoCyc databases) as well as imputed functions based on similarity of a known protein to the translated sequences [ 1].
The functional update was performed by manual evaluation of the data obtained from GenProtEC, BLAST and DARWIN analyses, and MAGPIE annotation.
GenProtEC also contains imputed function assignments based on sequence similarity to orthologous or paralogous proteins, on gene (operon) location and on phenotypes of mutants [ 18].
Since the deposit to GenBank was made, our database GenProtEC has continually been updated with knowledge on E. coli gene products appearing in the literature [ 3, 13].
A table containing the updated function assignments of E. coli K-12 gene products is available as an additional data file online, and at GenProtEC [ 4] and MAGPIE [ 11].