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Example sentences for: clustalx

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Comparison of FastGroup with ClustalX output
The overall alignment of the midasin M-domain from humans, yeast and Giardia with other MIDAS-containing proteins (three Mg-chelatases and the I-domains of three integrins) was created by first aligning the midasins, Mg-chelatases and integrins separately with the program T-Coffee [ 58 ] . The resultant three partial alignments were then combined by the profile alignment procedure of ClustalX, as above.
Bootstrap values were calculated using ClustalX and PHYLIP.
The FastGroup 8 contain sequences that differ from FastGroup 1 by a one bp gap, which explains the reason that ClustalX placed these sequences in Clade 1. Because this gap occurred in all four FastGroup 8 sequences, and not in any of the FastGroup 1 sequences, these two groups probably represent different 16S rDNAs and possibly two bacterial species.
Multiple sequence alignments were constructed with ClustalX [ 63, 64].