Words similar to clustal

Example sentences for: clustal

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Arabidopsis ORFs for CLUSTAL analysis were downloaded either using their GenBank accession numbers or, if not yet available, by searching the TAIR database with the respective gene name.
An alignment output from this source was used to create a dendrogram using TreeTop [ 45 ] with PHYLIP output (default parameters) at a node of the European Molecular Biology Network http://www.genebee.msu.su [ 47 ] . Potential phosphorylation sites were identified using NetPhos 2.0 http://www.cbs.dtu.dk/services/NetPhos [ 48 ] . After alignment with CLUSTAL W, identical and similar amino acids in Figure 3were identified using MacBoxshade 2.15 http://www.isrec.isb-sib.ch/ftp-server/boxshade/MacBoxshade.
Amino acid sequences were aligned using CLUSTAL W (v.
Parameters for CLUSTAL alignments were: Pairwise alignment: Ktuple, 1; gap Penalty, 3; windows, 5; diagonals saved, 5. Multiple alignment: gap penalty, 10; gap length penalty, 10.
Examination of the Clustal X-alignment of all the protein sequences revealed significant structural differences (Figure 3).