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Example sentences for: cgr

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However, by freeing the iterative map from the dual-dimensional constraint of conventional CGR, the USM forward map alone achieved the goal of producing a scale independent representation of sequences of arbitrary number of unique units.
Unif([0,1] n ). The random seed is not fundamentally different from using the middle position in the map as is conventional in CGR and it has the added feature that it prevents the invalidation of the inverse logarithmic proportionality of n-distance to sequence similarity [ 12 ] for sequences that start or end with the same motif.
It should be recalled that the particular dimensionality of DNA sequences, n = 2, allows a very convenient unidirectional bi-dimensional representation, which is in fact the Chaos Game Representation procedure (CGR) [ 5 ] . Consequently, CGR is a particular case of USM, obtained when n = 2 and only the forward coordinates are determined.
The forward USM map for genomic sequences, where uu = 4, and, consequently, n = 2, is the same as the result generated by CGR.
In this respect, USM departs from previous attempts to generalize Chaos Game Representation that conserve the bi-dimensionality of the original CGR representation [ 8 15 16 17 ] .