Example sentences for: all-atom

How can you use “all-atom” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • All models produced are refined using the Energy Calculation and Dynamics (ENCAD) package [ 36 ] . For a given protein sequence, there could be more than one all-atom model produced.

  • The weight is computed using the all-atom scoring function [ 32 ] . Edges are then drawn between pairs of residues/nodes that are consistent with each other (i.e.

  • For such cases, all models were ranked using the all-atom pairwise scoring function [ 32 ] and the best scoring models are considered to be the most native-like ones.

  • Generally, the lowest binding energy clusters are associated with the lowest all-atom RMSDs of the ligands.

  • The results for the globin family are given in Figure 4. On average, using the all-atom function improves model quality by 0.8 Å C α RMSD compared to only using sequence identity.

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