Words similar to all-atom

Example sentences for: all-atom

How can you use “all-atom” in a sentence? Here are some example sentences to help you improve your vocabulary:

Using the all-atom function alone to select native-like conformations is not likely to suffice when it is also used in the actual minimisation/search process, since all conformations generated in such searches represent local minima of this function.
The average all-atom RMSD for the complexes increases from 0.18 Å at 0.01 ps to 2.92 Å at the end of 10 ps of simulation time.
We initially start with an all-atom conformation where the torsion values for residues predicted to be in helix/sheet by PSIPRED secondary structure prediction [ 38 ] are set to idealised values [ 33 ] . The remaining φ/ψ values are set in an extended conformation.
Multiple side chain conformations for residue positions that differ in type between the template and target proteins were generated by exploring all the possibilities in a rotamer library [ 31 ] . The most probable conformations based on the interactions of a given conformation with the local main chain were selected using an all-atom distance dependent conditional probability discriminatory function [ 32 ] .
Docking solutions with ligand all-atom RMSDs within 1.0 Å of each other were clustered together and ranked by the lowest energy representative.