Example sentences for: all-against-all

How can you use “all-against-all” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • We then conducted an all-against-all homology modelling exercise where every member of the family was modelled on every other template (resulting in 29 and 60 models for each member of the globin and immunoglobulin families respectively).

  • For each group of genomes, all-against-all BLAST [ 28] comparisons were done using the predicted protein sequences.

  • An all-against-all structure comparison between all the initial models was used to produce a multiple sequence alignment based on structural similarity for a given family.

  • The database of Clusters of Orthologous Groups of proteins (COGs) was used as the source of information on orthologous genes in prokaryotic genomes [ 35 36 ] . Briefly, the COGs were constructed from the results of all-against-all BLAST [ 37 ] comparison of proteins encoded in complete genomes by detecting consistent groups of genome-specific best hits (BeTs).

  • This procedure was done by an all-against-all sequence similarity search ( E -value < 0.01) using FASTA, and polytopic membrane domains were clustered by applying a multiple linkage clustering method [ 30] to the FASTA results.

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