Words similar to alignments
Example sentences for: alignments
How can you use “alignments” in a sentence? Here are some example sentences to help you improve your vocabulary:
Perl scripts were used to parse sequence alignments from the BLAST output and identify the 100-residue section of each alignment that contained the maximum percentage identity obtainable in a window of that size for that alignment.
Multiple alignments of amino acid sequences were generated using a combination of PSI-BLAST, CLUSTALW [ 24] and secondary structure predictions that were produced using the PHD program [ 25] and the PSI-PRED program [ 26], with multiple alignments of individual protein families used as queries.
Our future aims for the CRW Site are to: 1) maintain a complete collection of sequences in our database management system for each of the RNAs under study; 2) once or twice a year, release new sequence alignments that contain A) improvements (if necessary) in the positioning of the sequences that are associated with similar structural elements, and B) increases in the number of aligned sequences; 3) generate more secondary structure diagrams for sequences that span the phylogenetic tree and reveal all forms of structural variation; 4) generate more secondary structure conservation diagrams and nucleotide and base pair frequency tables for more phylogenetic groups ( e.g.
Examination of the structure and multiple sequence alignments of bacterial β and β' subunits led to the identification of two additional, distinct domains, which so far are not detectable in any proteins other than the DDRP and were accordingly designated Beta-Beta' Module 1 (BBM1, region 119-165, 1iw7 chain D) and Beta-Beta' Module 2 (BBM2, region 1109-1190, 1iw7 chain D) (Fig.
Critical residues can be assessed with guidance from X-ray crystallography data (see legend) and invariant residues seen in multiple alignments.
Loading...