Example sentences for: alignments

How can you use “alignments” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • We run BLASTN [ 20, 21] with the '-B 0' option, as we are only interested in the summary part of the BLAST report, not in the high-scoring pairs (HSPs) portion where the alignments are shown.

  • Multiple alignments were constructed using the T_Coffee program [ 53], followed by manual correction based on the PSI-BLAST results.

  • Multiple sequence alignments were generated using the T_Coffee program [ 39 ] and the output was adjusted using PSI-BLAST search results and secondary structure predictions, which were conducted using the PHD [ 40 41 ] and Jpred [ 42 ] programs.

  • To address these problems, the Ensembl consortium relies initially on computational prediction, followed by confirmation with EST/protein alignments [ 11].

  • Multiple alignments were constructed using the T_Coffee program [ 41 ] , followed by manual correction based on the PSI-BLAST results.


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