Example sentences for: alignments

How can you use “alignments” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • This requires specially prepared Pfam full alignments and profile HMMs that are created with the HMMER software as follows:

  • Copies of the manuscript figures and tables and additional materials related to this work are available from the Gutell Laboratory's CRW Site at http://www.rna.icmb.utexas.edu/ANALYSIS/FUNGINT/ [ 44 ] . This page includes detailed rRNA conservation and intron position data (both the version used for the manuscript and current values that are updated daily), fungal nucleotide frequency values, and the SSU and LSU rRNA sequence alignments used in Table 2.

  • However, misleading alignments can be created by the presence of genomic DNA contaminants, cDNA clones containing two independent cDNAs co-ligated in the same plasmid vector (chimeras), and internal priming of cDNAs during library synthesis.

  • 1are rigorous because they consider many sequences and almost identical alignments are obtained with a variety of methods that all take into account residue similarities as well as identities.

  • CNCSs were identified in VISTA using a window size of 10 bp with an identity of 90% with manual post-processing to remove spurious matches at the beginning and end of the alignments.

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