Words similar to aligned
Example sentences for: aligned
How can you use “aligned” in a sentence? Here are some example sentences to help you improve your vocabulary:
MicroRNAs were aligned by BLASTN analysis; a single exact match was found for each of the microRNAs listed in FlyBase.
The sequences of AChBP, and of the alpha3, alpha4, alpha7, beta2 and beta4 nAChR monomers were aligned using the ICM multiple sequence alignment algorithm that includes the following steps [ 16 10 ] : 1) pairwise alignment using Needleman and Wunsch algorithm modified to use zero end gap penalties (so called ZEGA) [ 15 16 ] . 2) evolutionary tree construction with a "neighbor-joining algorithm" to determine the order of alignment and calculate relative weights of sequences and profiles from the branch lengths [ 17 ] . 3) traverse the tree from top to bottom, aligning the closest sequences or profiles.
Furthermore, mosaic proteins from sufficiently distant species might be impossible to be aligned over more than one domain at the time, since they are unlikely to exhibit the same domain organization.
Separately, for timing the origin of Giardia , sequences of 17 proteins were obtained from the public databases and aligned [ 37 ] in which the following taxa were available: Giardia and other eukaryotes (including calibration taxa; see below), archaebacteria, and eubacteria.
Approximately 8500 16S and 16S-like rRNA sequences and 1050 23S and 23S-like rRNA sequences were collected from all branches of the phylogenetic tree, as shown in Section 2, "Nucleotide Frequency and Conservation Information" and in Table 2. These sequences have been aligned and analyzed with several covariation algorithms, as described in more detail in the "Predicting RNA Structure with Comparative Methods" section of the CRW Site http://www.rna.icmb.utexas.edu/METHODS/and in Section 2A.
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