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Example sentences for: aj
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Together, the fungal spliceosomal data set included 49 different introns at the following sites (the species from which they were isolated and GenBank accession numbers, where available, are also shown): SSU rRNA - 265 ( Arthroraphis citrinella , AF279375), 297 ( Anaptychia runcinata , AJ421692), 298 ( Physconia perisidiosa , AJ421689), 299 ( Roccella canariensis , AF110342), 300 ( Rhynchostoma minutum , AF242268), 330 ( Stereocaulon paschale , AF279412), 331 ( Physconia perisidiosa , AJ421689), 332 ( Pyrenula cruenta , AF279406), 333 (
Along this line, BLAST searches in bacteria databases disclosed, in one incompletely sequenced bacterial genome ( Paenibacillus azotofixans ), an open reading frame (nt 3822 to 4583 in the AJ299453 genomic clone) which contains almost all and displays significant similarity with the yCCR4 C-terminal region, but does not contain a LRR nor a N-terminal domain.
The SSU 674 site ( Physconia detersa , AJ240495), for example, only included 10 nt of the 5' and 3' region in the GenBank accession [ 11 ] . All fungal and diatom intron sites were, however, mapped on the conservation diagrams to understand their distribution (see below).
Consistent with these findings, we found five proteins previously associated with this process, pf-actinI (M19146), pf-myoA (AF255909), and merozoite cap protein-1 (U14189), and two subtilisin-like proteases (PfSUB1 and PfSUB2 (AJ132422)) differentially enriched in schizonts.
Here, we describe the effect of coactivator proteins SRC-1 (Acc# AJ000882, U90661, Table 1) and p300 (Acc# U01877, Table 3), and their relation to differentiation genes such as retinoic acid receptor (RAR/PML, Acc#: X06614, Table 1), and Leptin receptor variant (Acc#: U66496, Table 1); all of which are down-regulated in Tat expressing cells (Figure 5).