Words similar to acetobutylicum
Example sentences for: acetobutylicum
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Because three arsC genes have been reported for different strains/plasmids of E. coli , and two arsC genes have been identified for both Salmonella typhimurium and Clostridium acetobutylicum (plasmid and chromosomal for each; Table 1 [see Additional file 1]) only one 16S rRNA sequence was used for each to avoid potential biases and inaccurate attractions due to sequence identity.
Species abbreviations used in this paper are as follows: AcNV, Autographa californica nucleopolyhedrosis virus; AgNV, Anticarsia gemmatalis nucleopolyhedrosis virus; AMV, Amsacta moorei entomopoxvirus; BPBK5T, Lactococcus phage BK5-T; BmNV, Bombyx mori nuclear polyhedrosis virus; BP933W, bacteriophage 933W; BPA118, bacteriophage A118; BPAPSE1, bacteriophage APSE1; BPbIL285, bacteriophage bIL285; BPbIL286, bacteriophage bIL286; BPbIL309, bacteriophage bIL309; BPD3, bacteriophage D3; BPφ80, bacteriophage φ80; BPHK620, bacteriophage HK620; BPHK97, bacteriophage HK97; BPLLH, bacteriophage LLH; BPMx8, bacteriophage Mx8; BPN15, bacteriophage N15; BPP1, bacteriophage P1; BPP22, bacteriophage P22; BPP4, bacteriophage P4; BPP27, bacteriophage P27; BPφPV, bacteriophage φPV; BPR1T, bacteriophage R1T; BPSpβC2, bacteriophage SpβC2; BPT5, bacteriophage T5; BPVT2-Sa, bacteriophage VT2; Cab, Clostridium acetobutylicum ; Cal, Candida albicans ; CIV, Chilo iridescent virus; CnBV, Culex nigripalpus baculovirus; CpGV, Cydia pomonella granulovirus; DpAV4, Diadromus pulchellus ascovirus; Ec, Escherichia coli ; EpNV, Epiphyas postvittana nucleopolyhedrovirus; EV, ectromelia virus; Eni, Emericella nidulans ; ESV, Ectocarpus siliculosus virus; FPV, fowlpox virus; HaEPV, Heliothis armigera entomopoxvirus; HaNV, Heliocoverpa armigera nucleopolyhedrovirus G4; HK97, bacteriophage HK97; HzNV, Helicoverpa zea single nucleocapsid nucleopolyhedrovirus; Kla, Kluyveromyces lactis ; LcBPA2, Lactobacillus casei bacteriophage A2; LdNV, Lymantria dispar nucleopolyhedrovirus; LsNV, Leucania separata nuclear polyhedrosis virus; MbNV, Mamestra brassicae nucleopolyhedrovirus; MSV, Melanoplus sanguinipes entomopoxvirus; Nc, Neurospora crassa ; Nm, Neisseria meningitidis ; OpNV, Orgyia pseudotsugata single capsid nuclear polyhedrosis virus; Pa, Pseudomonas aeruginosa ; PxGV, Plutella xylostella granulovirus; Sa,
148 is present in the actinomycetes and the Gram-positive bacterium Clostridium acetobutylicum . It shows a lineage-specific expansion in the former taxon, with 11 and 3 closely related, paralogous forms in the genomes of Streptomyces and Mycobacterium tuberculosis , respectively.
YonO was also detected with significant E-values in searches initiated with other eukaryotic RDRP modules, e.g., that of Schizosaccharomyces pombe . Reciprocal searches started with the YonO protein sequence retrieved closely related proteins encoded by prophages in the genome of Clostridium acetobutylicum (CAC1139) and Clostridium perfringens (CPE1103).
Mycobacterium tuberculosis and Streptomyces coelicolor (high-GC Gram-positive bacteria), and Streptococcus pneumoniae (low-GC Gram-positive bacterium) cluster with the plant and alpha-proteobacterial sequences in group 3, and a sequence from Clostridium acetobutylicum, a low-GC Gram-positive bacterium, clusters with the gamma-proteobacterial sequences in Group 1. (Note that synthesis of γ-glutamyl cysteine has been demonstrated in
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