Words similar to pssms
Example sentences for: pssms
How can you use “pssms” in a sentence? Here are some example sentences to help you improve your vocabulary:
As a control, several sets of 50 random 25-mers were generated by a random number generator (G = 1, A = 2, T = 3, C = 4) and none yielded any statistically significant PSSMs (where E-values <1.
The PSSMs were prepared by choosing one or more starting queries (seeds) for a set of most frequently encountered domains (see [ 34] for details) and run against the NR database until convergence with the -C option of PSI-BLAST to save the PSSM.
Furthermore, we were able to align the κB motif, the Sb sequence, the RSS nonamer, and part of the RSS heptamer "TGTG" with both PSSMs (Figs.
The computer program Multiple Alignment Sequence Tool (MAST version 3.0) [ 34 ] was used to search human and mouse genome databases for DNA elements matching the KRC-selected PSSMs.
The National Center for Biotechnology Information (NCBI) maintains a Conserved Domain Database (CDD) that uses PFAM and SMART [ 11 ] domain PSSMs to detect possible structural homologs.