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Example sentences for: orf-f

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Further analysis revealed that a 521 base pair region of P. stutzeri ORF-F shares 80% homology with M. tuberculosis moe Z [ 17 ] . The products of the pdt locus probably function by activating, then sulfurating, a carboxylic acid precursor.
We assembled a set of sequences similar to the product of Pseudomonas stutzeri pdt locus ORF-F ( Ps-moeZ ) (Table 1).
An open reading frame (ORF-F) identified as a necessary part of the Pseudomonas stutzeri pdt locus coding for the synthesis pathway of pdtc (Figure 1) was found to have 57% identity to M. tuberculosis MoeZ at the amino acid (AA) level.
BLAST searches were used to obtain the initial set of sequences similar to P. stutzeri strain KC ORF-F [ 38 ] . The program, BLAST 2 Sequences, was used to obtain the degrees of similarity and homology among amino acid (AA) and nucleic acid (NA) sequences [ 39 ] . Protein domains, as codified by Pfam [ 26 ] , were identified by searching the Conserved Domain Database using the Domain Architecture Retrieval Tool provided by GenBank.