Words similar to inteins

Example sentences for: inteins

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In contrast, a sequence alignment of all known inteins shows intein sequences to be much more divergent (not shown).
Multiple sequence alignments of diverse intein sequences identified eight motifs composed of moderately conserved residues [ 18 28 ] . The A-ATPase A subunit of the Thermoplasma and Pyrococcus intein multiple sequence alignment (with manual modification) is shown in figure 1. The T. acidophilum intein (173 amino acids long) is among the shortest inteins known, and the alignment with other inteins reveals the absence of sequences homologous to the typical endonuclease motifs.
For example, the P-value for the comparison between the T. acidophilum and the Saccharomyces cerevisiae intein was 0.28, i.e. no significant similarity between the yeast and the Thermoplasma inteins was detectable using pairwise alignments only.
Using PSI-BLAST [ 27 ] with different inteins as seeds, divergent inteins with less than ten percent sequence identity as compared to the query sequence are recovered (data not shown); however, using this approach we did not discover any additional intein or homing endonuclease encoding genes in T. acidophilum.
To date seven species have been identified to harbor inteins in their ATPase catalytic subunits.