Words similar to hmmer
Example sentences for: hmmer
How can you use “hmmer” in a sentence? Here are some example sentences to help you improve your vocabulary:
A curated multiple alignment A from the Pfam database for the protein family that Q belongs to (as determined by hmmpfam from the HMMER package).
Obviously, one can assign Pfam-A domains using the HMMer software [ 29], which they are closely associated with.
Alignment of the query sequence is done programs from the HMMER package http://hmmer.wustl.edu/.
We use the Pfam protein family database [ 8 ] as a source of high quality curated multiple sequence alignments and profile HMMs (Hidden Markov Models, see [ 21 ] for a review), as well as programs from the HMMER package http://hmmer.wustl.edu/.
These programs, with the exception of HMMER, are part of the FORESTER package and are available under the GNU license at http://www.genetics.wustl.edu/eddy/forester/.