Words similar to hmmer

Example sentences for: hmmer

How can you use “hmmer” in a sentence? Here are some example sentences to help you improve your vocabulary:

Alignment of the query sequence is done programs from the HMMER package http://hmmer.wustl.edu/.
Additionally, hidden Markov model based searches using a multiple alignment of known members were run using the HMMER2 package [ 36 ] . The Gibbs sampling procedure, as implemented in the MACAW program was used to detect and evaluate statistically significant conserved motifs [ 37 ] . Multiple alignments were constructed using the T_Coffee program [ 38 ] , followed by manual correction based on the PSI-BLAST results.
Obviously, one can assign Pfam-A domains using the HMMer software [ 29], which they are closely associated with.
In order to run RIO locally, the following packages and databases need to be present: HMMER, the Pfam database [ 8 ] , the SWISS-PROT and TrEMBL databases [ 36 ] .
The program hmmpfam (version 2.2 g) from the HMMER package was used to search each protein sequence in ATH1.pep.