Example sentences for: hmmer

How can you use “hmmer” in a sentence? Here are some example sentences to help you improve your vocabulary:

  • Additional searches with hidden Markov models were performed using the HMMER package [ 38, 39].

  • Sequence-profile searches were carried out using the PSI-BLAST program, with the cut-off for inclusion of sequences into the profile set at E = 0.01 [ 3, 9], and the HMMer program package [ 57].

  • In order to run RIO locally, the following packages and databases need to be present: HMMER, the Pfam database [ 8 ] , the SWISS-PROT and TrEMBL databases [ 36 ] .

  • The program hmmpfam (version 2.2 g) from the HMMER package was used to search each protein sequence in ATH1.pep.

  • In contrast, analyses using profile search algorithms such as HMMER http://hmmer.wustl.edu/and Pfam [ 8 ] classify sequences too generally.


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