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Example sentences for: expasy

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For ease of illustration and to emphasize USM's general validity, the test dataset used to describe implementation of the algorithm consists of two stanzas of a Poem by Wendy Cope, "The Uncertainty of the Poet" [ 14 ] . In the Discussion section, USM was also applied to the DNA sequence of the threonine operon of Escherichia coli K-12 MG1655, obtained from the University of Winsconsin E. coli Genome Project http:/www.genetics.wisc.edu, and to its 5'3' first frame proteomic translation obtained by using SwissProt on line translator http://www.expasy.ch/tools/dna.html.
The molecular weight was calculated using the primary structure analysis program available from ExPASY proteomics tools.
The genomic sequences of thrA and thrB were translated into proteomic sequences using SwissProt's on line translator, applied to the 5'3' first frame http://www.expasy.ch/tools/dna.html.
A non-redundant protein sequence database comprised of Swiss-Prot and TrEMBL was also downloaded from ftp://ftp.expasy.org/databases/sp_tr_nrdband the data were parsed and stored in Sybase.
Potential post-translational modification sites and nuclear localization signals were identified using PROSITE and Psort programs, respectively www.expasy.ch.