Words similar to expasy
Example sentences for: expasy
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For ease of illustration and to emphasize USM's general validity, the test dataset used to describe implementation of the algorithm consists of two stanzas of a Poem by Wendy Cope, "The Uncertainty of the Poet" [ 14 ] . In the Discussion section, USM was also applied to the DNA sequence of the threonine operon of Escherichia coli K-12 MG1655, obtained from the University of Winsconsin E. coli Genome Project http:/www.genetics.wisc.edu, and to its 5'3' first frame proteomic translation obtained by using SwissProt on line translator http://www.expasy.ch/tools/dna.html.
Using InterPro Scan via EXPASY, we determined that these few amino acids do not produce any potential phosphorylation sites or protein domains or motifs.
A non-redundant protein sequence database comprised of Swiss-Prot and TrEMBL was also downloaded from ftp://ftp.expasy.org/databases/sp_tr_nrdband the data were parsed and stored in Sybase.
We used the translated protein sequences from these intergenic ORFs and analyzed them using InterPro Scan via EXPASY.
The genomic sequences of thrA and thrB were translated into proteomic sequences using SwissProt's on line translator, applied to the 5'3' first frame http://www.expasy.ch/tools/dna.html.