Words similar to expasy
Example sentences for: expasy
How can you use “expasy” in a sentence? Here are some example sentences to help you improve your vocabulary:
Using InterPro Scan via EXPASY, we determined that these few amino acids do not produce any potential phosphorylation sites or protein domains or motifs.
The crystal structure of gp120 (1gcl) [ 13 ] was retrieved from the pdb ( http://www.rcsb.org) and the V3 loop, created by homology modeling {(based on the nmr structure of the V3 loop from 1ce4) using the SWISS-MODEL [ 24 ] automated comparative protein modeling server ( http://www.expasy.ch/SWISS-MODEL.html} was attached to the gp120 crystal structure using Quanta's protein design module.
The assembled cDNA sequence was subjected to hypothetical translation using the "Translate" program available on the EXPASY website www.expasy.ch.
For ease of illustration and to emphasize USM's general validity, the test dataset used to describe implementation of the algorithm consists of two stanzas of a Poem by Wendy Cope, "The Uncertainty of the Poet" [ 14 ] . In the Discussion section, USM was also applied to the DNA sequence of the threonine operon of Escherichia coli K-12 MG1655, obtained from the University of Winsconsin E. coli Genome Project http:/www.genetics.wisc.edu, and to its 5'3' first frame proteomic translation obtained by using SwissProt on line translator http://www.expasy.ch/tools/dna.html.
The genomic sequences of thrA and thrB were translated into proteomic sequences using SwissProt's on line translator, applied to the 5'3' first frame http://www.expasy.ch/tools/dna.html.